BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B12SP1|AL430187
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig384 1605 0.0
>3x_Contig384
Length = 1678
Score = 1605 bits (806), Expect = 0.0
Identities = 856/878 (97%)
Strand = Plus / Plus
Query: 1 gcagcagtttgakccaatggagttctagcctcactggattgtcataacggtctctctgat 60
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 29 gcagcagtttgagccaatggagttctagcctcactggattgtgataacggtctctctgag 88
Query: 61 aacgtgaaatggtcatctatkgaaatcggacttctatttcccacaggtnangaanctgta 120
|||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||||
Sbjct: 89 aacgtgaaatggtcatctatggaaatcggacttctatttcccacaggtgaggaagctgta 148
Query: 121 ngttgaggtgggctttgtgtttcatctggaataatcaccggggactgatttagtgaaaac 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 149 ggttgaggtgggctttgtgtttcatctggaataatgaccggggactgatttagtgaaaac 208
Query: 181 sctctatctatcttaataacgtcattgtcttcactagctaattccttctcatcagcttct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gctctatctatcttaataacgtcattgtcttcactagctaattccttctcatcagcttct 268
Query: 241 ggtttgtsatcctcttcatctgaactccagtcgattgatgctgtctttggaatgactgta 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtttgtgatcctcttcatctgaactccagtcgattgatgctgtctttggaatgactgta 328
Query: 301 gaactctgcmaaattgcattaagtgcagaattctcatcttctggtaatttttccaccgac 360
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaagtctgcaaagttgcattaagtgcagaattctcatcttctggtaatttttccaccgac 388
Query: 361 gtattatttatactgctaggtacaattggcgatggcttagaatcaagtacgtgtaatgca 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 389 gtattatttatactgctaggtacaattggcgatggcttaaaatcaagtacgtgtaatgca 448
Query: 421 ggaaaagagacctctgccttgtcattcgaattaamatcttcatcagtatcagcatttggg 480
||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 449 ggagaggagacctctgccttgtcattcgaattaaaatcttcatcagtatcagcatttggg 508
Query: 481 aattcctgataatctgcttcttctggttcaggtaacgtgtcaaacccacgtcttctgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aattcctgataatctgcttcttctggttcaggtaacgtgtcaaacccacgtcttctgatt 568
Query: 541 tccaaaacaatatcatccaccaaatcattaaatctcgcattggataacttcgccaatttt 600
|| |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 569 tcgaaaagaatatcatcgaccaaatcattaaatctcgcattggataagttcgccaatttt 628
Query: 601 tgtcttgcctggttcctctttgcatggaaactttcattaggaactaaatagtcatgttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgtcttgcctggttcctctttgcatggaaactttcattaggaactaaatagtcatgttgt 688
Query: 661 ggctgtgattcatcaattcgtctttgcaattcgtcgctgacgtcagtactcaactcgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ggctgtgattcatcaattcgtctttgcaattcgtcgctgacgtcagtactcaactcgaaa 748
Query: 721 aactgtgacgaagaaagttttaacagctttgaacgtgctttctgagcacgcgatgtcatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aactgtgacgaagaaagttttaacagctttgaacgtgctttctgagcacgcgatgtcatt 808
Query: 781 gatctatcatggctaccaccggtaacctcaaagaattgttttaaagcaacataataatta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gatctatcatggctaccaccggtaacctcaaagaattgttttaaagcaacataataatta 868
Query: 841 tggatctgcactttttgtgcatatttcagttccttagc 878
||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tggatctgcactttttgtgcatatttcagttccttagc 906
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6078
Number of Sequences: 1807
Number of extensions: 6078
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)